Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Spcs1-204ENSMUST00000226782 949 ntBASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha8Q91Y12 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 AA386476-201ENSMUST00000098781 1665 ntBASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha8Q91Y12 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha8Q91Y12 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha8Q91Y12 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Pcdha8Q91Y12 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha8Q91Y12 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdha8Q91Y12 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha8Q91Y12 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Gm27454-201ENSMUST00000185090 204 ntBASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha8Q91Y12 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Gm12251-201ENSMUST00000117893 792 ntBASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha8Q91Y12 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms