Protein–RNA interactions for Protein: Q91WE6

Cdkal1, Threonylcarbamoyladenosine tRNA methylthiotransferase, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkal1Q91WE6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.86■□□□□ 0.61
Cdkal1Q91WE6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkal1Q91WE6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkal1Q91WE6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkal1Q91WE6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Serp2-204ENSMUST00000228055 705 ntBASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkal1Q91WE6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdkal1Q91WE6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkal1Q91WE6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdkal1Q91WE6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdkal1Q91WE6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdkal1Q91WE6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Gm21956-201ENSMUST00000179946 522 ntBASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkal1Q91WE6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkal1Q91WE6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdkal1Q91WE6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms