Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H1fooQ8VIK3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H1fooQ8VIK3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H1fooQ8VIK3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H1fooQ8VIK3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
H1fooQ8VIK3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
H1fooQ8VIK3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Gm43137-201ENSMUST00000198052 594 ntBASIC16.13■□□□□ 0.17
H1fooQ8VIK3 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Gm13241-201ENSMUST00000094493 780 ntBASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H1fooQ8VIK3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H1fooQ8VIK3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.11■□□□□ 0.17
H1fooQ8VIK3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.11■□□□□ 0.17
H1fooQ8VIK3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H1fooQ8VIK3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms