Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SfpqQ8VIJ6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 AA386476-201ENSMUST00000098781 1665 ntBASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SfpqQ8VIJ6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SfpqQ8VIJ6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SfpqQ8VIJ6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SfpqQ8VIJ6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Gm15820-201ENSMUST00000201566 728 ntBASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SfpqQ8VIJ6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Golph3-205ENSMUST00000228671 2842 ntBASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SfpqQ8VIJ6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SfpqQ8VIJ6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SfpqQ8VIJ6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SfpqQ8VIJ6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms