Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lmcd1Q8VEE1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lmcd1Q8VEE1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lmcd1Q8VEE1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Gm2559-201ENSMUST00000201323 363 ntBASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lmcd1Q8VEE1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Gm37055-201ENSMUST00000191866 133 ntBASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Lmcd1Q8VEE1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lmcd1Q8VEE1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Lmcd1Q8VEE1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Gm9987-201ENSMUST00000069768 567 ntBASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lmcd1Q8VEE1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Gm18666-201ENSMUST00000190039 958 ntBASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lmcd1Q8VEE1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Lmcd1Q8VEE1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmcd1Q8VEE1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lmcd1Q8VEE1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.7■□□□□ 0.9
Lmcd1Q8VEE1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Lmcd1Q8VEE1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Mir1199-201ENSMUST00000117015 119 ntBASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmcd1Q8VEE1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lmcd1Q8VEE1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms