Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb1Q8R3Z5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb1Q8R3Z5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacnb1Q8R3Z5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacnb1Q8R3Z5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cacnb1Q8R3Z5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb1Q8R3Z5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb1Q8R3Z5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb1Q8R3Z5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb1Q8R3Z5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb1Q8R3Z5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Smad6-203ENSMUST00000179458 273 ntBASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 AC140209.1-201ENSMUST00000227875 284 ntBASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cacnb1Q8R3Z5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Gm40848-201ENSMUST00000221998 324 ntBASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Serp2-204ENSMUST00000228055 705 ntBASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb1Q8R3Z5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb1Q8R3Z5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Gm25509-201ENSMUST00000116985 106 ntBASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 AC073947.1-201ENSMUST00000216991 649 ntBASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb1Q8R3Z5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb1Q8R3Z5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb1Q8R3Z5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb1Q8R3Z5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb1Q8R3Z5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb1Q8R3Z5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Cacnb1Q8R3Z5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Cacnb1Q8R3Z5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cacnb1Q8R3Z5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms