Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28bQ8CEG5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28bQ8CEG5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc28bQ8CEG5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28bQ8CEG5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc28bQ8CEG5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28bQ8CEG5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28bQ8CEG5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28bQ8CEG5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28bQ8CEG5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 BC021767-201ENSMUST00000126387 1716 ntBASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28bQ8CEG5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Gm10232-201ENSMUST00000089221 720 ntBASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28bQ8CEG5 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28bQ8CEG5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28bQ8CEG5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms