Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trmt6Q8CE96 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trmt6Q8CE96 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trmt6Q8CE96 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trmt6Q8CE96 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trmt6Q8CE96 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Etf1-202ENSMUST00000180351 108 ntBASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trmt6Q8CE96 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Gm7417-201ENSMUST00000192950 473 ntBASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Trmt6Q8CE96 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trmt6Q8CE96 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trmt6Q8CE96 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Gm7143-201ENSMUST00000222811 859 ntBASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trmt6Q8CE96 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms