Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc49a3Q8CE47 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Gm7143-201ENSMUST00000222811 859 ntBASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc49a3Q8CE47 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc49a3Q8CE47 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc49a3Q8CE47 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc49a3Q8CE47 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slc49a3Q8CE47 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc49a3Q8CE47 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
Slc49a3Q8CE47 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc49a3Q8CE47 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Mir6236-201ENSMUST00000184437 123 ntBASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc49a3Q8CE47 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc49a3Q8CE47 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc49a3Q8CE47 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms