Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc46a2Q8CA03 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc46a2Q8CA03 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.58■□□□□ 0.57
Slc46a2Q8CA03 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc46a2Q8CA03 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc46a2Q8CA03 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc46a2Q8CA03 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a2Q8CA03 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Gm15820-201ENSMUST00000201566 728 ntBASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a2Q8CA03 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a2Q8CA03 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Etf1-202ENSMUST00000180351 108 ntBASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a2Q8CA03 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a2Q8CA03 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a2Q8CA03 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms