Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx6Q8C7R7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rfx6Q8C7R7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx6Q8C7R7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx6Q8C7R7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx6Q8C7R7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfx6Q8C7R7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx6Q8C7R7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx6Q8C7R7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx6Q8C7R7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx6Q8C7R7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx6Q8C7R7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rfx6Q8C7R7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Rfx6Q8C7R7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.57■□□□□ 0.72
Rfx6Q8C7R7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rfx6Q8C7R7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx6Q8C7R7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx6Q8C7R7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx6Q8C7R7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms