Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Tsen54Q8C2A2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Tsen54Q8C2A2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tsen54Q8C2A2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tsen54Q8C2A2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tsen54Q8C2A2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Gm10399-202ENSMUST00000202768 748 ntBASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tsen54Q8C2A2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms