Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Vps9d1Q8C190 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Golph3-205ENSMUST00000228671 2842 ntBASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps9d1Q8C190 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps9d1Q8C190 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Gm13241-201ENSMUST00000094493 780 ntBASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps9d1Q8C190 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps9d1Q8C190 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Vps9d1Q8C190 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Gm9847-201ENSMUST00000052528 599 ntBASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Vps9d1Q8C190 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Vps9d1Q8C190 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Vps9d1Q8C190 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18■□□□□ 0.47
Vps9d1Q8C190 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms