Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne1Q8C166 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne1Q8C166 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne1Q8C166 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Iqck-206ENSMUST00000208658 2891 ntBASIC18.09■□□□□ 0.49
Cpne1Q8C166 AA386476-201ENSMUST00000098781 1665 ntBASIC18.09■□□□□ 0.49
Cpne1Q8C166 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne1Q8C166 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne1Q8C166 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne1Q8C166 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Cpne1Q8C166 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne1Q8C166 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne1Q8C166 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Serp2-204ENSMUST00000228055 705 ntBASIC18.06■□□□□ 0.48
Cpne1Q8C166 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne1Q8C166 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne1Q8C166 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.04■□□□□ 0.48
Cpne1Q8C166 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Gm26833-201ENSMUST00000180899 440 ntBASIC18.04■□□□□ 0.48
Cpne1Q8C166 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne1Q8C166 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.03■□□□□ 0.48
Cpne1Q8C166 Gm40848-201ENSMUST00000221998 324 ntBASIC18.03■□□□□ 0.48
Cpne1Q8C166 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne1Q8C166 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne1Q8C166 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms