Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atg16l1Q8C0J2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atg16l1Q8C0J2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Gm10232-201ENSMUST00000089221 720 ntBASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg16l1Q8C0J2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg16l1Q8C0J2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg16l1Q8C0J2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg16l1Q8C0J2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.27■□□□□ 0.67
Atg16l1Q8C0J2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atg16l1Q8C0J2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg16l1Q8C0J2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg16l1Q8C0J2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atg16l1Q8C0J2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg16l1Q8C0J2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg16l1Q8C0J2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms