Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Skida1Q80YR3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 AC132881.2-201ENSMUST00000225474 709 ntBASIC18.97■□□□□ 0.63
Skida1Q80YR3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Skida1Q80YR3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Skida1Q80YR3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC18.96■□□□□ 0.63
Skida1Q80YR3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Skida1Q80YR3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Smad6-203ENSMUST00000179458 273 ntBASIC18.95■□□□□ 0.62
Skida1Q80YR3 Gm9723-201ENSMUST00000192100 457 ntBASIC18.95■□□□□ 0.62
Skida1Q80YR3 AV356131-201ENSMUST00000206201 750 ntBASIC18.95■□□□□ 0.62
Skida1Q80YR3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.95■□□□□ 0.62
Skida1Q80YR3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.95■□□□□ 0.62
Skida1Q80YR3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Gm43066-201ENSMUST00000199589 1260 ntBASIC18.94■□□□□ 0.62
Skida1Q80YR3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.94■□□□□ 0.62
Skida1Q80YR3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Skida1Q80YR3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.93■□□□□ 0.62
Skida1Q80YR3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Gm22923-201ENSMUST00000174952 110 ntBASIC18.93■□□□□ 0.62
Skida1Q80YR3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.93■□□□□ 0.62
Skida1Q80YR3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Skida1Q80YR3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Skida1Q80YR3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Skida1Q80YR3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.92■□□□□ 0.62
Skida1Q80YR3 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Skida1Q80YR3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Skida1Q80YR3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Skida1Q80YR3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Skida1Q80YR3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Gm42651-201ENSMUST00000199851 1339 ntBASIC18.91■□□□□ 0.62
Skida1Q80YR3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Skida1Q80YR3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms