Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc116Q80X53 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc116Q80X53 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Spcs1-204ENSMUST00000226782 949 ntBASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc116Q80X53 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Golph3-205ENSMUST00000228671 2842 ntBASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc116Q80X53 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc116Q80X53 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Gm13241-201ENSMUST00000094493 780 ntBASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc116Q80X53 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc116Q80X53 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms