Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh19Q80TF3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh19Q80TF3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pcdh19Q80TF3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Pcdh19Q80TF3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh19Q80TF3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh19Q80TF3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdh19Q80TF3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh19Q80TF3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh19Q80TF3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh19Q80TF3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh19Q80TF3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Gm37179-201ENSMUST00000194862 823 ntBASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh19Q80TF3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh19Q80TF3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms