Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h4Q6ZPZ3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm27275-201ENSMUST00000184318 272 ntBASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h4Q6ZPZ3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Dio3-201ENSMUST00000097228 1449 ntBASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.74■■□□□ 1.07
Zc3h4Q6ZPZ3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h4Q6ZPZ3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h4Q6ZPZ3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h4Q6ZPZ3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Zc3h4Q6ZPZ3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h4Q6ZPZ3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Zc3h4Q6ZPZ3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h4Q6ZPZ3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3h4Q6ZPZ3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Zc3h4Q6ZPZ3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3h4Q6ZPZ3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.67■■□□□ 1.06
Zc3h4Q6ZPZ3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.67■■□□□ 1.06
Zc3h4Q6ZPZ3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms