Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rad54bQ6PFE3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.51■□□□□ 0.71
Rad54bQ6PFE3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Gm45102-201ENSMUST00000207427 857 ntBASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rad54bQ6PFE3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rad54bQ6PFE3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rad54bQ6PFE3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rad54bQ6PFE3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rad54bQ6PFE3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rad54bQ6PFE3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rad54bQ6PFE3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Gm14117-201ENSMUST00000122417 843 ntBASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 484.4 ms