Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abcf1Q6P542 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Abcf1Q6P542 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.58■■□□□ 1.05
Abcf1Q6P542 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.58■■□□□ 1.05
Abcf1Q6P542 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Abcf1Q6P542 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Abcf1Q6P542 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Abcf1Q6P542 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Abcf1Q6P542 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Gm21956-201ENSMUST00000179946 522 ntBASIC21.57■■□□□ 1.04
Abcf1Q6P542 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Abcf1Q6P542 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Abcf1Q6P542 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Abcf1Q6P542 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.55■■□□□ 1.04
Abcf1Q6P542 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abcf1Q6P542 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Abcf1Q6P542 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.53■■□□□ 1.04
Abcf1Q6P542 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.53■■□□□ 1.04
Abcf1Q6P542 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Abcf1Q6P542 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcf1Q6P542 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abcf1Q6P542 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.5■■□□□ 1.03
Abcf1Q6P542 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abcf1Q6P542 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Abcf1Q6P542 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms