Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sp140Q6NSQ5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sp140Q6NSQ5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sp140Q6NSQ5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sp140Q6NSQ5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sp140Q6NSQ5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sp140Q6NSQ5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sp140Q6NSQ5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.57■□□□□ 0.72
Sp140Q6NSQ5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms