Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SnrpaQ62189 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SnrpaQ62189 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SnrpaQ62189 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SnrpaQ62189 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SnrpaQ62189 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SnrpaQ62189 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SnrpaQ62189 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
SnrpaQ62189 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SnrpaQ62189 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SnrpaQ62189 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SnrpaQ62189 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SnrpaQ62189 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SnrpaQ62189 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.41■□□□□ 0.7
SnrpaQ62189 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
SnrpaQ62189 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.41■□□□□ 0.7
SnrpaQ62189 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.41■□□□□ 0.7
SnrpaQ62189 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.41■□□□□ 0.7
SnrpaQ62189 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SnrpaQ62189 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SnrpaQ62189 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.4■□□□□ 0.7
SnrpaQ62189 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SnrpaQ62189 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SnrpaQ62189 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SnrpaQ62189 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.39■□□□□ 0.69
SnrpaQ62189 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SnrpaQ62189 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SnrpaQ62189 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.38■□□□□ 0.69
SnrpaQ62189 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.38■□□□□ 0.69
SnrpaQ62189 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.38■□□□□ 0.69
SnrpaQ62189 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SnrpaQ62189 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SnrpaQ62189 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
SnrpaQ62189 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SnrpaQ62189 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SnrpaQ62189 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.36■□□□□ 0.69
SnrpaQ62189 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SnrpaQ62189 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.36■□□□□ 0.69
SnrpaQ62189 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SnrpaQ62189 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SnrpaQ62189 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SnrpaQ62189 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SnrpaQ62189 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms