Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Smarcd1Q61466 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
Smarcd1Q61466 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd1Q61466 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd1Q61466 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd1Q61466 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd1Q61466 Gm18671-201ENSMUST00000214826 683 ntBASIC20.25■□□□□ 0.83
Smarcd1Q61466 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd1Q61466 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd1Q61466 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd1Q61466 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Reep4-203ENSMUST00000226563 1444 ntBASIC20.24■□□□□ 0.83
Smarcd1Q61466 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd1Q61466 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Smarcd1Q61466 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Gm10033-202ENSMUST00000211874 928 ntBASIC20.23■□□□□ 0.83
Smarcd1Q61466 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd1Q61466 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Smarcd1Q61466 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd1Q61466 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Gm26571-201ENSMUST00000181399 666 ntBASIC20.22■□□□□ 0.83
Smarcd1Q61466 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd1Q61466 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Gm13234-201ENSMUST00000120010 747 ntBASIC20.21■□□□□ 0.83
Smarcd1Q61466 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd1Q61466 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcd1Q61466 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Gm10849-201ENSMUST00000100397 618 ntBASIC20.2■□□□□ 0.82
Smarcd1Q61466 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Gm42569-201ENSMUST00000200539 472 ntBASIC20.2■□□□□ 0.82
Smarcd1Q61466 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smarcd1Q61466 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.19■□□□□ 0.82
Smarcd1Q61466 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd1Q61466 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd1Q61466 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 AV356131-201ENSMUST00000206201 750 ntBASIC20.17■□□□□ 0.82
Smarcd1Q61466 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd1Q61466 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd1Q61466 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd1Q61466 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd1Q61466 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smarcd1Q61466 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Smarcd1Q61466 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarcd1Q61466 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd1Q61466 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd1Q61466 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd1Q61466 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms