Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Traf4Q61382 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Traf4Q61382 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Traf4Q61382 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Traf4Q61382 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.04■□□□□ 0.32
Traf4Q61382 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Traf4Q61382 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.04■□□□□ 0.32
Traf4Q61382 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Traf4Q61382 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Traf4Q61382 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.03■□□□□ 0.32
Traf4Q61382 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Traf4Q61382 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.03■□□□□ 0.32
Traf4Q61382 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Traf4Q61382 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.02■□□□□ 0.32
Traf4Q61382 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Traf4Q61382 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Traf4Q61382 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.02■□□□□ 0.32
Traf4Q61382 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Traf4Q61382 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Traf4Q61382 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Traf4Q61382 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Traf4Q61382 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Traf4Q61382 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Traf4Q61382 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Traf4Q61382 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Traf4Q61382 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Traf4Q61382 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.01■□□□□ 0.31
Traf4Q61382 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.01■□□□□ 0.31
Traf4Q61382 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.01■□□□□ 0.31
Traf4Q61382 Gm43060-201ENSMUST00000200621 289 ntBASIC17.01■□□□□ 0.31
Traf4Q61382 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
Traf4Q61382 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.01■□□□□ 0.31
Traf4Q61382 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Traf4Q61382 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.01■□□□□ 0.31
Traf4Q61382 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
Traf4Q61382 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.01■□□□□ 0.31
Traf4Q61382 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Traf4Q61382 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17■□□□□ 0.31
Traf4Q61382 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17■□□□□ 0.31
Traf4Q61382 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Traf4Q61382 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17■□□□□ 0.31
Traf4Q61382 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Traf4Q61382 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17■□□□□ 0.31
Traf4Q61382 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.99■□□□□ 0.31
Traf4Q61382 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Traf4Q61382 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Traf4Q61382 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Traf4Q61382 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Traf4Q61382 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
Traf4Q61382 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Traf4Q61382 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Traf4Q61382 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Traf4Q61382 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Traf4Q61382 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Traf4Q61382 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Traf4Q61382 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Traf4Q61382 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.98■□□□□ 0.31
Traf4Q61382 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.98■□□□□ 0.31
Traf4Q61382 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms