Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Col11a1Q61245 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Col11a1Q61245 Gm15565-201ENSMUST00000118890 427 ntBASIC22.1■■□□□ 1.13
Col11a1Q61245 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.1■■□□□ 1.13
Col11a1Q61245 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Col11a1Q61245 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Col11a1Q61245 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a1Q61245 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.09■■□□□ 1.13
Col11a1Q61245 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.09■■□□□ 1.13
Col11a1Q61245 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.09■■□□□ 1.13
Col11a1Q61245 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col11a1Q61245 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.09■■□□□ 1.13
Col11a1Q61245 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col11a1Q61245 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Col11a1Q61245 Gm37055-201ENSMUST00000191866 133 ntBASIC22.08■■□□□ 1.13
Col11a1Q61245 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a1Q61245 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a1Q61245 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a1Q61245 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a1Q61245 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a1Q61245 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.08■■□□□ 1.12
Col11a1Q61245 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.08■■□□□ 1.12
Col11a1Q61245 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a1Q61245 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a1Q61245 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a1Q61245 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.07■■□□□ 1.12
Col11a1Q61245 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a1Q61245 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Col11a1Q61245 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a1Q61245 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Col11a1Q61245 AA386476-201ENSMUST00000098781 1665 ntBASIC22.07■■□□□ 1.12
Col11a1Q61245 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a1Q61245 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a1Q61245 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Col11a1Q61245 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.06■■□□□ 1.12
Col11a1Q61245 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Col11a1Q61245 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm10698-201ENSMUST00000182663 604 ntBASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm2559-201ENSMUST00000201323 363 ntBASIC22.06■■□□□ 1.12
Col11a1Q61245 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.06■■□□□ 1.12
Col11a1Q61245 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.06■■□□□ 1.12
Col11a1Q61245 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a1Q61245 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a1Q61245 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a1Q61245 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a1Q61245 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a1Q61245 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a1Q61245 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.04■■□□□ 1.12
Col11a1Q61245 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a1Q61245 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Col11a1Q61245 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a1Q61245 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a1Q61245 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.03■■□□□ 1.12
Col11a1Q61245 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a1Q61245 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col11a1Q61245 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col11a1Q61245 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a1Q61245 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.02■■□□□ 1.12
Col11a1Q61245 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a1Q61245 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a1Q61245 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a1Q61245 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a1Q61245 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms