Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ptch1Q61115 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ptch1Q61115 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ptch1Q61115 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Ptch1Q61115 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ptch1Q61115 Gm11643-201ENSMUST00000119578 864 ntBASIC28.45■■■□□ 2.15
Ptch1Q61115 Gm2559-201ENSMUST00000201323 363 ntBASIC28.45■■■□□ 2.15
Ptch1Q61115 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Ptch1Q61115 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Ptch1Q61115 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptch1Q61115 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptch1Q61115 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptch1Q61115 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ptch1Q61115 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC28.44■■■□□ 2.14
Ptch1Q61115 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Ptch1Q61115 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC28.44■■■□□ 2.14
Ptch1Q61115 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch1Q61115 Gm43909-201ENSMUST00000203443 1876 ntBASIC28.44■■■□□ 2.14
Ptch1Q61115 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch1Q61115 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch1Q61115 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch1Q61115 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch1Q61115 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Ptch1Q61115 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC28.43■■■□□ 2.14
Ptch1Q61115 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Ptch1Q61115 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ptch1Q61115 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Ptch1Q61115 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ptch1Q61115 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ptch1Q61115 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
Ptch1Q61115 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Ptch1Q61115 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Ptch1Q61115 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC28.4■■■□□ 2.14
Ptch1Q61115 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC28.4■■■□□ 2.14
Ptch1Q61115 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Ptch1Q61115 AC154649.1-201ENSMUST00000227392 384 ntBASIC28.4■■■□□ 2.14
Ptch1Q61115 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptch1Q61115 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptch1Q61115 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptch1Q61115 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptch1Q61115 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ptch1Q61115 Gm11249-201ENSMUST00000117071 859 ntBASIC28.39■■■□□ 2.14
Ptch1Q61115 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC28.39■■■□□ 2.14
Ptch1Q61115 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ptch1Q61115 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ptch1Q61115 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ptch1Q61115 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC28.39■■■□□ 2.14
Ptch1Q61115 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Ptch1Q61115 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Ptch1Q61115 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC28.38■■■□□ 2.13
Ptch1Q61115 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Ptch1Q61115 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptch1Q61115 AA386476-201ENSMUST00000098781 1665 ntBASIC28.37■■■□□ 2.13
Ptch1Q61115 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ptch1Q61115 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Ptch1Q61115 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ptch1Q61115 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ptch1Q61115 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ptch1Q61115 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Ptch1Q61115 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC28.35■■■□□ 2.13
Ptch1Q61115 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Ptch1Q61115 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptch1Q61115 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Ptch1Q61115 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC28.35■■■□□ 2.13
Ptch1Q61115 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC28.35■■■□□ 2.13
Ptch1Q61115 Gm27032-201ENSMUST00000183124 1116 ntBASIC28.35■■■□□ 2.13
Ptch1Q61115 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC28.35■■■□□ 2.13
Ptch1Q61115 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC28.34■■■□□ 2.13
Ptch1Q61115 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ptch1Q61115 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Ptch1Q61115 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ptch1Q61115 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC28.33■■■□□ 2.13
Ptch1Q61115 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ptch1Q61115 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Ptch1Q61115 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ptch1Q61115 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ptch1Q61115 Gm21596-201ENSMUST00000178049 1316 ntBASIC28.33■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms