Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Rarb-207ENSMUST00000225921 2756 ntBASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1lQ5XFR0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1lQ5XFR0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1lQ5XFR0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1lQ5XFR0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1lQ5XFR0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pabpn1lQ5XFR0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.32■□□□□ 0.68
Pabpn1lQ5XFR0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1lQ5XFR0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1lQ5XFR0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpn1lQ5XFR0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpn1lQ5XFR0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.27■□□□□ 0.68
Pabpn1lQ5XFR0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms