Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.98■■□□□ 1.43
Ubr3Q5U430 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ubr3Q5U430 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr3Q5U430 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.97■■□□□ 1.43
Ubr3Q5U430 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ubr3Q5U430 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.96■■□□□ 1.43
Ubr3Q5U430 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ubr3Q5U430 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.96■■□□□ 1.43
Ubr3Q5U430 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ubr3Q5U430 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Ubr3Q5U430 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ubr3Q5U430 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ubr3Q5U430 Gm10698-201ENSMUST00000182663 604 ntBASIC23.95■■□□□ 1.42
Ubr3Q5U430 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Ubr3Q5U430 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ubr3Q5U430 Gm6576-201ENSMUST00000169678 883 ntBASIC23.94■■□□□ 1.42
Ubr3Q5U430 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr3Q5U430 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.94■■□□□ 1.42
Ubr3Q5U430 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.94■■□□□ 1.42
Ubr3Q5U430 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.93■■□□□ 1.42
Ubr3Q5U430 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr3Q5U430 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Gm15565-201ENSMUST00000118890 427 ntBASIC23.92■■□□□ 1.42
Ubr3Q5U430 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.92■■□□□ 1.42
Ubr3Q5U430 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr3Q5U430 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Gm37055-201ENSMUST00000191866 133 ntBASIC23.9■■□□□ 1.42
Ubr3Q5U430 Gm2559-201ENSMUST00000201323 363 ntBASIC23.9■■□□□ 1.42
Ubr3Q5U430 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr3Q5U430 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.9■■□□□ 1.42
Ubr3Q5U430 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.9■■□□□ 1.42
Ubr3Q5U430 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ubr3Q5U430 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.89■■□□□ 1.41
Ubr3Q5U430 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr3Q5U430 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr3Q5U430 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr3Q5U430 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr3Q5U430 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.88■■□□□ 1.41
Ubr3Q5U430 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms