Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.21□□□□□ -0.29
Trav3-1Q5R1I8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-1Q5R1I8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-1Q5R1I8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-1Q5R1I8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-1Q5R1I8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav3-1Q5R1I8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-1Q5R1I8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Peli2-204ENSMUST00000226513 1320 ntBASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-1Q5R1I8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-1Q5R1I8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms