Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clhc1Q5M6W3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clhc1Q5M6W3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Clhc1Q5M6W3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clhc1Q5M6W3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clhc1Q5M6W3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 Gm14117-201ENSMUST00000122417 843 ntBASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clhc1Q5M6W3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clhc1Q5M6W3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clhc1Q5M6W3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms