Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.15■□□□□ 0.66
Scn2bQ56A07 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn2bQ56A07 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn2bQ56A07 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn2bQ56A07 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.14■□□□□ 0.65
Scn2bQ56A07 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.14■□□□□ 0.65
Scn2bQ56A07 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn2bQ56A07 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn2bQ56A07 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Scn2bQ56A07 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn2bQ56A07 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn2bQ56A07 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn2bQ56A07 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.11■□□□□ 0.65
Scn2bQ56A07 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 AA386476-201ENSMUST00000098781 1665 ntBASIC19.11■□□□□ 0.65
Scn2bQ56A07 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn2bQ56A07 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.1■□□□□ 0.65
Scn2bQ56A07 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn2bQ56A07 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.09■□□□□ 0.65
Scn2bQ56A07 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.09■□□□□ 0.65
Scn2bQ56A07 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Scn2bQ56A07 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Scn2bQ56A07 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.08■□□□□ 0.65
Scn2bQ56A07 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn2bQ56A07 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn2bQ56A07 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn2bQ56A07 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn2bQ56A07 Gm21956-201ENSMUST00000179946 522 ntBASIC19.07■□□□□ 0.64
Scn2bQ56A07 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn2bQ56A07 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn2bQ56A07 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Scn2bQ56A07 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms