Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.49■■□□□ 1.19
Rc3h1Q4VGL6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.49■■□□□ 1.19
Rc3h1Q4VGL6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rc3h1Q4VGL6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rc3h1Q4VGL6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rc3h1Q4VGL6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Gm7514-201ENSMUST00000209475 934 ntBASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.46■■□□□ 1.19
Rc3h1Q4VGL6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.45■■□□□ 1.19
Rc3h1Q4VGL6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Gm13146-201ENSMUST00000118508 780 ntBASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rc3h1Q4VGL6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rc3h1Q4VGL6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rc3h1Q4VGL6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rc3h1Q4VGL6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rc3h1Q4VGL6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.4■■□□□ 1.18
Rc3h1Q4VGL6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms