Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb28Q3V2L0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Defb28Q3V2L0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Defb28Q3V2L0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb28Q3V2L0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Gm715-201ENSMUST00000117865 831 ntBASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.74■□□□□ 0.59
Defb28Q3V2L0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.73■□□□□ 0.59
Defb28Q3V2L0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Defb28Q3V2L0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Defb28Q3V2L0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Defb28Q3V2L0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Defb28Q3V2L0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.69■□□□□ 0.58
Defb28Q3V2L0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms