Protein–RNA interactions for Protein: Q3UW77

Gm12888, MCG59630, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12888Q3UW77 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.39□□□□□ -0.11
Gm12888Q3UW77 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm12888Q3UW77 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm12888Q3UW77 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Mir6538-201ENSMUST00000183713 110 ntBASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Gm45444-201ENSMUST00000211394 898 ntBASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12888Q3UW77 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Gm10399-202ENSMUST00000202768 748 ntBASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12888Q3UW77 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12888Q3UW77 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12888Q3UW77 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12888Q3UW77 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12888Q3UW77 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12888Q3UW77 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12888Q3UW77 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12888Q3UW77 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms