Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.18■■□□□ 1.3
Spg7Q3ULF4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Spg7Q3ULF4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Spg7Q3ULF4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg7Q3ULF4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Spg7Q3ULF4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
Spg7Q3ULF4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Gm13534-201ENSMUST00000121169 513 ntBASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.14■■□□□ 1.29
Spg7Q3ULF4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Spg7Q3ULF4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Spg7Q3ULF4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Spg7Q3ULF4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Spg7Q3ULF4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.11■■□□□ 1.29
Spg7Q3ULF4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.11■■□□□ 1.29
Spg7Q3ULF4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Spg7Q3ULF4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm7290-201ENSMUST00000104990 617 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm12918-201ENSMUST00000120234 636 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm15710-201ENSMUST00000121821 636 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm27011-201ENSMUST00000182352 972 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm5075-201ENSMUST00000196916 622 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg7Q3ULF4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Gm7860-201ENSMUST00000121190 879 ntBASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Gm6420-201ENSMUST00000193885 723 ntBASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Spg7Q3ULF4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Gm6365-201ENSMUST00000054711 744 ntBASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Spg7Q3ULF4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Spg7Q3ULF4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms