Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cln6Q3U466 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cln6Q3U466 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cln6Q3U466 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Cln6Q3U466 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cln6Q3U466 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cln6Q3U466 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cln6Q3U466 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cln6Q3U466 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.46■□□□□ 0.23
Cln6Q3U466 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cln6Q3U466 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cln6Q3U466 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Cln6Q3U466 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cln6Q3U466 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cln6Q3U466 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.45■□□□□ 0.22
Cln6Q3U466 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cln6Q3U466 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.45■□□□□ 0.22
Cln6Q3U466 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.45■□□□□ 0.22
Cln6Q3U466 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.45■□□□□ 0.22
Cln6Q3U466 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cln6Q3U466 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cln6Q3U466 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Gm15820-201ENSMUST00000201566 728 ntBASIC16.44■□□□□ 0.22
Cln6Q3U466 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.44■□□□□ 0.22
Cln6Q3U466 Gm9870-201ENSMUST00000063874 645 ntBASIC16.44■□□□□ 0.22
Cln6Q3U466 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cln6Q3U466 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Cln6Q3U466 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.43■□□□□ 0.22
Cln6Q3U466 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Cln6Q3U466 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Cln6Q3U466 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cln6Q3U466 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cln6Q3U466 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cln6Q3U466 Gm43530-201ENSMUST00000195920 274 ntBASIC16.42■□□□□ 0.22
Cln6Q3U466 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cln6Q3U466 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Cln6Q3U466 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cln6Q3U466 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.41■□□□□ 0.22
Cln6Q3U466 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.41■□□□□ 0.22
Cln6Q3U466 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.41■□□□□ 0.22
Cln6Q3U466 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cln6Q3U466 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cln6Q3U466 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln6Q3U466 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cln6Q3U466 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.4■□□□□ 0.22
Cln6Q3U466 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.4■□□□□ 0.22
Cln6Q3U466 Gm7417-201ENSMUST00000192950 473 ntBASIC16.4■□□□□ 0.22
Cln6Q3U466 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms