Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Khdc4Q3TCX3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Khdc4Q3TCX3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Khdc4Q3TCX3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.39■□□□□ 0.54
Khdc4Q3TCX3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Khdc4Q3TCX3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc4Q3TCX3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc4Q3TCX3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc4Q3TCX3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc4Q3TCX3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Khdc4Q3TCX3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc4Q3TCX3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Gm10849-201ENSMUST00000100397 618 ntBASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc4Q3TCX3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Gm37179-201ENSMUST00000194862 823 ntBASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.35■□□□□ 0.53
Khdc4Q3TCX3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Khdc4Q3TCX3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc4Q3TCX3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Khdc4Q3TCX3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Khdc4Q3TCX3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc4Q3TCX3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc4Q3TCX3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc4Q3TCX3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc4Q3TCX3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 AV356131-201ENSMUST00000206201 750 ntBASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc4Q3TCX3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc4Q3TCX3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc4Q3TCX3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc4Q3TCX3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Khdc4Q3TCX3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms