Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl9Q32KG4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Gm27405-201ENSMUST00000184201 112 ntBASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Gm29257-201ENSMUST00000186115 639 ntBASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl9Q32KG4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl9Q32KG4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl9Q32KG4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rtl9Q32KG4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rtl9Q32KG4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rtl9Q32KG4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl9Q32KG4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl9Q32KG4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Rtl9Q32KG4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Gm18671-201ENSMUST00000214826 683 ntBASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rtl9Q32KG4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Gm10033-202ENSMUST00000211874 928 ntBASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl9Q32KG4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rtl9Q32KG4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.45■□□□□ 0.87
Rtl9Q32KG4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl9Q32KG4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rtl9Q32KG4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rtl9Q32KG4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl9Q32KG4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms