Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col19a1Q0VF58 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col19a1Q0VF58 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col19a1Q0VF58 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col19a1Q0VF58 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col19a1Q0VF58 Gm11249-201ENSMUST00000117071 859 ntBASIC20.9■□□□□ 0.94
Col19a1Q0VF58 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Col19a1Q0VF58 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col19a1Q0VF58 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col19a1Q0VF58 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.89■□□□□ 0.94
Col19a1Q0VF58 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col19a1Q0VF58 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col19a1Q0VF58 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Gm10231-201ENSMUST00000181584 441 ntBASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Gm10175-202ENSMUST00000208752 441 ntBASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col19a1Q0VF58 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Mir1199-201ENSMUST00000117015 119 ntBASIC20.87■□□□□ 0.93
Col19a1Q0VF58 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col19a1Q0VF58 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Gm21362-201ENSMUST00000194272 928 ntBASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col19a1Q0VF58 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col19a1Q0VF58 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col19a1Q0VF58 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col19a1Q0VF58 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col19a1Q0VF58 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Gm18666-201ENSMUST00000190039 958 ntBASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms