Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CiitaP79621 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Gm13146-201ENSMUST00000118508 780 ntBASIC21.08■□□□□ 0.97
CiitaP79621 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.08■□□□□ 0.97
CiitaP79621 Gm37179-201ENSMUST00000194862 823 ntBASIC21.08■□□□□ 0.97
CiitaP79621 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.08■□□□□ 0.97
CiitaP79621 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CiitaP79621 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.08■□□□□ 0.96
CiitaP79621 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.08■□□□□ 0.96
CiitaP79621 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CiitaP79621 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
CiitaP79621 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CiitaP79621 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CiitaP79621 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.07■□□□□ 0.96
CiitaP79621 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CiitaP79621 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CiitaP79621 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CiitaP79621 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CiitaP79621 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CiitaP79621 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CiitaP79621 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CiitaP79621 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CiitaP79621 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CiitaP79621 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CiitaP79621 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CiitaP79621 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CiitaP79621 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.05■□□□□ 0.96
CiitaP79621 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CiitaP79621 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CiitaP79621 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.05■□□□□ 0.96
CiitaP79621 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CiitaP79621 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CiitaP79621 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.05■□□□□ 0.96
CiitaP79621 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CiitaP79621 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
CiitaP79621 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.04■□□□□ 0.96
CiitaP79621 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CiitaP79621 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.04■□□□□ 0.96
CiitaP79621 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.04■□□□□ 0.96
CiitaP79621 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.04■□□□□ 0.96
CiitaP79621 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CiitaP79621 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CiitaP79621 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CiitaP79621 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CiitaP79621 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CiitaP79621 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CiitaP79621 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CiitaP79621 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CiitaP79621 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CiitaP79621 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.03■□□□□ 0.96
CiitaP79621 Gm38205-201ENSMUST00000192243 258 ntBASIC21.03■□□□□ 0.96
CiitaP79621 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.03■□□□□ 0.96
CiitaP79621 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CiitaP79621 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CiitaP79621 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CiitaP79621 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.03■□□□□ 0.96
CiitaP79621 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CiitaP79621 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CiitaP79621 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CiitaP79621 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.02■□□□□ 0.96
CiitaP79621 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CiitaP79621 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CiitaP79621 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CiitaP79621 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CiitaP79621 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CiitaP79621 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.01■□□□□ 0.95
CiitaP79621 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.01■□□□□ 0.95
CiitaP79621 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.01■□□□□ 0.95
CiitaP79621 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.01■□□□□ 0.95
CiitaP79621 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.01■□□□□ 0.95
CiitaP79621 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CiitaP79621 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CiitaP79621 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21■□□□□ 0.95
CiitaP79621 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CiitaP79621 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms