Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ldb1P70662 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Ldb1P70662 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.27■□□□□ 0.68
Ldb1P70662 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.27■□□□□ 0.68
Ldb1P70662 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb1P70662 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ldb1P70662 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ldb1P70662 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ldb1P70662 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.26■□□□□ 0.67
Ldb1P70662 Gm12821-201ENSMUST00000120022 600 ntBASIC19.26■□□□□ 0.67
Ldb1P70662 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb1P70662 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb1P70662 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.25■□□□□ 0.67
Ldb1P70662 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
Ldb1P70662 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ldb1P70662 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb1P70662 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ldb1P70662 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
Ldb1P70662 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.23■□□□□ 0.67
Ldb1P70662 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ldb1P70662 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb1P70662 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ldb1P70662 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ldb1P70662 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.22■□□□□ 0.67
Ldb1P70662 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.22■□□□□ 0.67
Ldb1P70662 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb1P70662 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ldb1P70662 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.21■□□□□ 0.67
Ldb1P70662 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Gm8493-201ENSMUST00000196881 489 ntBASIC19.21■□□□□ 0.67
Ldb1P70662 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb1P70662 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ldb1P70662 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Ldb1P70662 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb1P70662 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb1P70662 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb1P70662 Gm43173-201ENSMUST00000202246 593 ntBASIC19.2■□□□□ 0.66
Ldb1P70662 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.2■□□□□ 0.66
Ldb1P70662 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.2■□□□□ 0.66
Ldb1P70662 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb1P70662 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Ldb1P70662 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb1P70662 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb1P70662 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
Ldb1P70662 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb1P70662 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb1P70662 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Ldb1P70662 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms