Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.55■■□□□ 1.04
Tpm1P58771 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.55■■□□□ 1.04
Tpm1P58771 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm1P58771 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tpm1P58771 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Cap2-205ENSMUST00000225824 1634 ntBASIC21.54■■□□□ 1.04
Tpm1P58771 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tpm1P58771 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm1P58771 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Tpm1P58771 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Tpm1P58771 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.53■■□□□ 1.04
Tpm1P58771 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tpm1P58771 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tpm1P58771 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tpm1P58771 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tpm1P58771 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Tpm1P58771 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.52■■□□□ 1.04
Tpm1P58771 Gm40881-201ENSMUST00000223397 166 ntBASIC21.52■■□□□ 1.04
Tpm1P58771 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tpm1P58771 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tpm1P58771 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Tpm1P58771 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.51■■□□□ 1.03
Tpm1P58771 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
Tpm1P58771 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tpm1P58771 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tpm1P58771 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tpm1P58771 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tpm1P58771 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.5■■□□□ 1.03
Tpm1P58771 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tpm1P58771 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tpm1P58771 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Tpm1P58771 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tpm1P58771 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Tpm1P58771 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.48■■□□□ 1.03
Tpm1P58771 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.48■■□□□ 1.03
Tpm1P58771 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Tpm1P58771 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Tpm1P58771 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.48■■□□□ 1.03
Tpm1P58771 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.48■■□□□ 1.03
Tpm1P58771 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Tpm1P58771 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Tpm1P58771 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tpm1P58771 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Tpm1P58771 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tpm1P58771 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tpm1P58771 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms