Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdkn2bP55271 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.58■□□□□ 0.57
Cdkn2bP55271 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.58■□□□□ 0.57
Cdkn2bP55271 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn2bP55271 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn2bP55271 BC021767-201ENSMUST00000126387 1716 ntBASIC18.58■□□□□ 0.57
Cdkn2bP55271 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn2bP55271 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn2bP55271 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cdkn2bP55271 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.58■□□□□ 0.56
Cdkn2bP55271 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.57■□□□□ 0.56
Cdkn2bP55271 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2bP55271 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdkn2bP55271 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2bP55271 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Gm15546-201ENSMUST00000122095 826 ntBASIC18.54■□□□□ 0.56
Cdkn2bP55271 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Cdkn2bP55271 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.54■□□□□ 0.56
Cdkn2bP55271 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2bP55271 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdkn2bP55271 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2bP55271 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn2bP55271 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn2bP55271 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2bP55271 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.51■□□□□ 0.55
Cdkn2bP55271 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Gm9959-201ENSMUST00000068277 390 ntBASIC18.51■□□□□ 0.55
Cdkn2bP55271 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.51■□□□□ 0.55
Cdkn2bP55271 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2bP55271 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms