Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atxn1P54254 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.2■□□□□ 0.66
Atxn1P54254 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.2■□□□□ 0.66
Atxn1P54254 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Atxn1P54254 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atxn1P54254 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn1P54254 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.19■□□□□ 0.66
Atxn1P54254 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
Atxn1P54254 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn1P54254 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atxn1P54254 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn1P54254 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.18■□□□□ 0.66
Atxn1P54254 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Atxn1P54254 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atxn1P54254 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atxn1P54254 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn1P54254 Notumos-201ENSMUST00000151998 2659 ntBASIC19.18■□□□□ 0.66
Atxn1P54254 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atxn1P54254 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn1P54254 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atxn1P54254 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.16■□□□□ 0.66
Atxn1P54254 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Gm37856-201ENSMUST00000191634 999 ntBASIC19.16■□□□□ 0.66
Atxn1P54254 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn1P54254 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Atxn1P54254 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn1P54254 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atxn1P54254 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atxn1P54254 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atxn1P54254 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Atxn1P54254 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.14■□□□□ 0.65
Atxn1P54254 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atxn1P54254 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atxn1P54254 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Atxn1P54254 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Atxn1P54254 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Atxn1P54254 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atxn1P54254 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Atxn1P54254 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Atxn1P54254 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atxn1P54254 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atxn1P54254 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atxn1P54254 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Atxn1P54254 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Atxn1P54254 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.12■□□□□ 0.65
Atxn1P54254 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms