Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.88■□□□□ 0.61
Lbx1P52955 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lbx1P52955 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lbx1P52955 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lbx1P52955 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lbx1P52955 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.87■□□□□ 0.61
Lbx1P52955 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.87■□□□□ 0.61
Lbx1P52955 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.87■□□□□ 0.61
Lbx1P52955 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.87■□□□□ 0.61
Lbx1P52955 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lbx1P52955 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lbx1P52955 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Lbx1P52955 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.86■□□□□ 0.61
Lbx1P52955 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lbx1P52955 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lbx1P52955 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.85■□□□□ 0.61
Lbx1P52955 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lbx1P52955 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Lbx1P52955 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lbx1P52955 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lbx1P52955 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.84■□□□□ 0.61
Lbx1P52955 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.84■□□□□ 0.61
Lbx1P52955 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lbx1P52955 Dio3-201ENSMUST00000097228 1449 ntBASIC18.83■□□□□ 0.61
Lbx1P52955 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.83■□□□□ 0.61
Lbx1P52955 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.83■□□□□ 0.6
Lbx1P52955 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Lbx1P52955 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lbx1P52955 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Lbx1P52955 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.82■□□□□ 0.6
Lbx1P52955 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lbx1P52955 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lbx1P52955 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lbx1P52955 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.81■□□□□ 0.6
Lbx1P52955 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.81■□□□□ 0.6
Lbx1P52955 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.81■□□□□ 0.6
Lbx1P52955 Gm44771-201ENSMUST00000206975 626 ntBASIC18.81■□□□□ 0.6
Lbx1P52955 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.81■□□□□ 0.6
Lbx1P52955 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lbx1P52955 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lbx1P52955 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lbx1P52955 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lbx1P52955 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lbx1P52955 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.8■□□□□ 0.6
Lbx1P52955 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lbx1P52955 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lbx1P52955 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lbx1P52955 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.79■□□□□ 0.6
Lbx1P52955 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lbx1P52955 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lbx1P52955 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lbx1P52955 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.78■□□□□ 0.6
Lbx1P52955 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lbx1P52955 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lbx1P52955 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms