Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4bP46467 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4bP46467 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vps4bP46467 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4bP46467 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4bP46467 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4bP46467 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.58■□□□□ 0.73
Vps4bP46467 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4bP46467 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4bP46467 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4bP46467 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4bP46467 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.58■□□□□ 0.72
Vps4bP46467 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.58■□□□□ 0.72
Vps4bP46467 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4bP46467 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.58■□□□□ 0.72
Vps4bP46467 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vps4bP46467 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Vps4bP46467 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.57■□□□□ 0.72
Vps4bP46467 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Vps4bP46467 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.57■□□□□ 0.72
Vps4bP46467 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps4bP46467 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps4bP46467 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps4bP46467 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.56■□□□□ 0.72
Vps4bP46467 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps4bP46467 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Vps4bP46467 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps4bP46467 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Vps4bP46467 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.53■□□□□ 0.72
Vps4bP46467 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Vps4bP46467 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Vps4bP46467 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Vps4bP46467 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Vps4bP46467 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps4bP46467 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps4bP46467 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.52■□□□□ 0.72
Vps4bP46467 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.52■□□□□ 0.72
Vps4bP46467 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.52■□□□□ 0.72
Vps4bP46467 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps4bP46467 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Vps4bP46467 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps4bP46467 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps4bP46467 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps4bP46467 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps4bP46467 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vps4bP46467 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.51■□□□□ 0.71
Vps4bP46467 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.51■□□□□ 0.71
Vps4bP46467 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps4bP46467 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps4bP46467 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps4bP46467 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Vps4bP46467 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps4bP46467 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps4bP46467 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vps4bP46467 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps4bP46467 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms