Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cd9P40240 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cd9P40240 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cd9P40240 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cd9P40240 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.16■□□□□ 0.66
Cd9P40240 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
Cd9P40240 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd9P40240 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.15■□□□□ 0.66
Cd9P40240 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.15■□□□□ 0.66
Cd9P40240 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cd9P40240 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cd9P40240 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd9P40240 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Cd9P40240 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cd9P40240 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cd9P40240 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd9P40240 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cd9P40240 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Gm45417-201ENSMUST00000209533 758 ntBASIC19.14■□□□□ 0.65
Cd9P40240 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cd9P40240 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cd9P40240 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd9P40240 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cd9P40240 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Gm27801-201ENSMUST00000184174 223 ntBASIC19.13■□□□□ 0.65
Cd9P40240 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd9P40240 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cd9P40240 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Cd9P40240 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cd9P40240 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.12■□□□□ 0.65
Cd9P40240 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.12■□□□□ 0.65
Cd9P40240 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd9P40240 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cd9P40240 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.11■□□□□ 0.65
Cd9P40240 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.11■□□□□ 0.65
Cd9P40240 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.11■□□□□ 0.65
Cd9P40240 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Cd9P40240 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.11■□□□□ 0.65
Cd9P40240 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cd9P40240 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd9P40240 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd9P40240 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd9P40240 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd9P40240 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cd9P40240 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd9P40240 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cd9P40240 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cd9P40240 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Cd9P40240 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd9P40240 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cd9P40240 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd9P40240 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd9P40240 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cd9P40240 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.08■□□□□ 0.65
Cd9P40240 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms