Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.99■□□□□ 0.15
Cdkn1aP39689 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cdkn1aP39689 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Cdkn1aP39689 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn1aP39689 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cdkn1aP39689 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Gm29257-201ENSMUST00000186115 639 ntBASIC15.97■□□□□ 0.15
Cdkn1aP39689 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.97■□□□□ 0.15
Cdkn1aP39689 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdkn1aP39689 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.96■□□□□ 0.15
Cdkn1aP39689 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.96■□□□□ 0.15
Cdkn1aP39689 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdkn1aP39689 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdkn1aP39689 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdkn1aP39689 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Gm37179-201ENSMUST00000194862 823 ntBASIC15.95■□□□□ 0.14
Cdkn1aP39689 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkn1aP39689 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkn1aP39689 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms