Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.12■□□□□ 0.65
HmgclP38060 Gm26833-201ENSMUST00000180899 440 ntBASIC19.12■□□□□ 0.65
HmgclP38060 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.12■□□□□ 0.65
HmgclP38060 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.11■□□□□ 0.65
HmgclP38060 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HmgclP38060 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HmgclP38060 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HmgclP38060 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
HmgclP38060 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HmgclP38060 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HmgclP38060 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HmgclP38060 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HmgclP38060 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HmgclP38060 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.1■□□□□ 0.65
HmgclP38060 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HmgclP38060 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.1■□□□□ 0.65
HmgclP38060 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HmgclP38060 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HmgclP38060 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HmgclP38060 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HmgclP38060 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.09■□□□□ 0.65
HmgclP38060 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HmgclP38060 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HmgclP38060 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HmgclP38060 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HmgclP38060 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HmgclP38060 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HmgclP38060 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HmgclP38060 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.08■□□□□ 0.65
HmgclP38060 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HmgclP38060 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.08■□□□□ 0.64
HmgclP38060 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HmgclP38060 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HmgclP38060 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.07■□□□□ 0.64
HmgclP38060 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HmgclP38060 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HmgclP38060 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HmgclP38060 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.06■□□□□ 0.64
HmgclP38060 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HmgclP38060 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.06■□□□□ 0.64
HmgclP38060 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.05■□□□□ 0.64
HmgclP38060 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.05■□□□□ 0.64
HmgclP38060 Gm27801-201ENSMUST00000184174 223 ntBASIC19.05■□□□□ 0.64
HmgclP38060 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.05■□□□□ 0.64
HmgclP38060 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HmgclP38060 Gm40848-201ENSMUST00000221998 324 ntBASIC19.05■□□□□ 0.64
HmgclP38060 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
HmgclP38060 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HmgclP38060 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.04■□□□□ 0.64
HmgclP38060 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.04■□□□□ 0.64
HmgclP38060 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms